Name: [Mm04237572_m1] [D130020L05Rik]
Creator: Thermo Fisher Scientific
Keywords: [D130020L05Rik] Assay, [RIKEN cDNA D130020L05 gene] Assay

Assay Details

Gene Symbol: D130020L05Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_038048.1		2 - 3	1790		98
RefSeq	NR_038050.1		1 - 2	2048		98

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BE945203.1	-	1 - 2		Chr. 12 - 101083949 - 101088179 [-] on Build GRCm38	98
GenBankmRNA	W71688.1	-		262	Chr. - - [-] on Build	98
GenBankmRNA	W99999.1	-	2 - 3	262	Chr. 12 - 101083978 - 101088176 [+] on Build GRCm38	98
GenBankmRNA	BF458644.1	-	1 - 2		Chr. 12 - 101083954 - 101088179 [-] on Build GRCm38	98
GenBankmRNA	BE456811.1	-	1 - 2		Chr. 12 - 101083904 - 101088172 [-] on Build GRCm38	98
GenBankmRNA	BY733208.1	-	2 - 3	470	Chr. 12 - 101083775 - 101088183 [+] on Build GRCm38	98

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	SMEK homolog 1, suppressor of mek1 (Dictyostelium)	Smek1	1110034C04Rik, BC064465, mKIAA2010	-582.0	Anti-sense	Chr. 12 - 101039409 - 101083702 on NCBI Build GRCm38
Downstream	kinesin family member 4, pseudogene	Kif4-ps	4930463M05Rik, Kif4b	56.7kb	Sense	Chr. 12 - 101145609 - 101149273 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1200001000.mm.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Mus musculus

Probe spans exons

MicroArray Probes:

Agilent Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P300856	AK047073.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P300856	NR_038050.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P300856	AK034570.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P300856	AK047073.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P300856	NR_038050.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_52_P300856	AK034570.1	mouse_transcriptome
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	462525	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	625034	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	955722	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	61603	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P126435	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P300856	AK047073.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P300856	NR_038050.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P300856	AK034570.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P300856	AK047073.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P300856	NR_038050.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_52_P300856	AK034570.1	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_53_P126435	-	-
Whole Mouse Genome G4122A	A_52_P300856	AK047073.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P300856	NR_038050.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P300856	AK034570.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P300856	AK047073.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P300856	NR_038050.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P300856	AK034570.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P329164	AK087910.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P329164	NR_038050.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P329164	NR_038048.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P329164	NR_038049.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P329164	NR_038047.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P273567	AK047073.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P273567	AK087910.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P273567	NR_038050.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P273567	AK034570.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P273567	NR_038048.1	mouse_transcriptome
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_53_P126435	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1457054_PM_a_at	-	-
Mouse Genome 430 2.0 Array	1457054_a_at	-	-
Mouse Genome 430 2.0 Array	1457054_PM_a_at	-	-
Affymetrix Mouse Clariom S Array	PSR1200007015.mm.1	NR_038050.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007015.mm.1	NR_038050.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007015.mm.1	TC1200001000.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1200007016.mm.1	NR_038050.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007016.mm.1	NR_038050.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1200007016.mm.1	TC1200001000.mm.1	MTA TC
Mouse Expression Set 430	1457054_a_at	-	-
Mouse Expression Set 430	1457054_PM_a_at	-	-
Affymetrix HT Mouse Genome 430B Array	1457054_a_at	-	-
Affymetrix HT Mouse Genome 430B Array	1457054_PM_a_at	-	-

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Catalog #	4426961
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Array Name	Probe IDs	Targets	Target Type
MouseWG-6 v2 Expression BeadChip	104480110	-	-
MouseWG-6 v2 Expression BeadChip	104670446	-	-
Illumina mouse-6 v1.0 expression beadchip	104480110	-	-
Illumina mouse-6 v1.1 expression beadchip	ILMN_1225838	-	-
Illumina Sentrix mouse-6.v1 bead array	104480110	-	-
Illumina Sentrix Mouse-6 Expression BeadChip (2)	104480110	-	-
Illumina MouseWG-6 v2.0 expression beadchip	ILMN_1225838	-	-

System Message

Genomic Map