Name: [Mm04242415_s1] [Speer5-ps1]
Creator: Thermo Fisher Scientific
Keywords: [Speer5-ps1] Assay, [spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1] Assay

Assay Details

Gene Symbol: Speer5-ps1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_001582.2		7	1310		128
RefSeq	NR_027506.1		4	848		128
GenBank mRNA	BB679670.1	-	1	291		128

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	AV206592.1	-	1	187	Chr. 10 - 44219277 - 44219583 [+] on Build GRCm38	128
GenBankmRNA	AV039433.2	-	1	161	Chr. 10 - 44219303 - 44219583 [+] on Build GRCm38	128
GenBankmRNA	AV210376.1	-	1	186	Chr. 10 - 44219278 - 44219583 [+] on Build GRCm38	128

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	absent in melanoma 1	Aim1	AI462491, AI463325	-70.1kb	Anti-sense	Chr. 10 - 43950307 - 44148924 on NCBI Build GRCm38
Downstream	predicted gene, 40637	Gm40637		48.2kb	Anti-sense	Chr. 10 - 44267742 - 44268243 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1000000412.mm.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Detect Genomic DNA

Mus musculus

1700

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P184508	NR_001582.2	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P184508	NR_027506.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P184508	DV646842.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P184508	NR_001582.2	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P184508	NR_027506.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_51_P184508	DV646842.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2033278	NR_001582.2	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2033278	NR_027506.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2033278	BB679670.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2033278	DV646842.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2132223	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	210110	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	972096	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	774551	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	852828	AK035267.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	852828	AK145464.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	166044	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	207911	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	724593	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	376386	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	727504	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	61896	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	102404	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	149626	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	152661	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P141278	-	-
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2033278	NR_001582.2	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2033278	NR_027506.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2033278	BB679670.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2033278	DV646842.1	mouse_transcriptome
SurePrint G3 Mouse Gene Expression Microarray G4852A	A_55_P2132223	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_67_P07045185	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_67_P07045218	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_53_P141278	-	-
Whole Mouse Genome G4122A	A_51_P184508	NR_001582.2	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P184508	NR_027506.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P184508	DV646842.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P184508	NR_001582.2	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P184508	NR_027506.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_51_P184508	DV646842.1	mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P134313	-	-
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_53_P141278	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104198	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104264	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104243	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104240	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104236	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104219	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104197	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08739994	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104200	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104222	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104229	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104223	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104276	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104250	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104228	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104262	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104211	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08452229	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104248	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08788976	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104269	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104260	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08904156	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08941992	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08216439	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104209	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104246	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104214	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104272	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104208	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104224	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104285	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104231	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08216440	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104256	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104225	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104265	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104213	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08291499	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08900100	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104270	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104199	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104230	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104259	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104226	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104252	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08615062	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104218	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08626303	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08712838	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104283	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P08216441	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P27104277	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1430008_PM_x_at	-	-
Mouse Genome 430 2.0 Array	1430008_x_at	-	-
Mouse Genome 430 2.0 Array	1430008_PM_x_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	70365_at	-	-
Affymetrix GeneChip Mouse Genome 430 2.0 Array	70365_PM_at	-	-
Affymetrix Mouse Clariom S Array	PSR1000002803.mm.1	NR_027506.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000002803.mm.1	TC1000000412.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1000002810.mm.1	NR_001582.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1000002810.mm.1	NR_027506.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000002810.mm.1	TC1000000412.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1000002811.mm.1	NR_001582.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1000002811.mm.1	NR_027506.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000002811.mm.1	TC1000000412.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1000002809.mm.1	NR_001582.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1000002809.mm.1	NR_027506.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1000002809.mm.1	TC1000000412.mm.1	MTA TC
Mouse Expression Set 430	1430008_PM_x_at	-	-
Mouse Expression Set 430	1430008_x_at	-	-
Murine Genome U74v2 Set	168149_r_at	-	-
Murine Genome U74v2 Set	168149_PM_r_at	-	-
Affymetrix HT Mouse Genome 430B Array	1430008_PM_x_at	-	-
Affymetrix HT Mouse Genome 430B Array	1430008_x_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	812394	-	-

Array Name	Probe IDs	Targets	Target Type
MouseWG-6 v2 Expression BeadChip	2850364	-	-
Illumina mouse-6 v1.0 expression beadchip	2850364	-	-
Illumina mouseRef-8 v1.0 expression beadchip	0002850364	-	-
Illumina mouseRef-8 v1.1 expression beadchip	ILMN_2748533	-	-
Illumina mouse-6 v1.1 expression beadchip	ILMN_2748533	-	-
mouse-6 v1.1 (Illumina)	scl38955.8.1_275-S	-	-
Illumina Sentrix mouse-6.v1 bead array	2850364	-	-
Illumina Sentrix MouseRef-8 Expression BeadChip	scl38955.8.1_275-S	-	-
Illumina Sentrix Mouse-6 Expression BeadChip (2)	2850364	-	-
MouseRef-8 v2 Expression BeadChip	ILMN_2748533	-	-
Illumina MouseWG-6 v2.0 expression beadchip	ILMN_2748533	-	-

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Catalog #	4426961
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Genomic Map