Name: [Mm04278201_m1] [Crxos]
Creator: Thermo Fisher Scientific
Keywords: [Crxos] Assay, [cone-rod homeobox, opposite strand] Assay

Assay Details

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BB642159.1	-	1 - 2	165		Chr. 7 - 15882617 - 15898722 [+] on Build GRCm38	94
GenBankmRNA	BY742111.1	-	1 - 2	165		Chr. 7 - 15882617 - 15898745 [+] on Build GRCm38	94

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	cone-rod homeobox	Crx	Crx1	-2.7kb	Anti-sense	Chr. 7 - 15865947 - 15879955 on NCBI Build GRCm38
Downstream	selenoprotein W, muscle 1	Sepw1	selW	33.7kb	Anti-sense	Chr. 7 - 15917208 - 15922371 on NCBI Build GRCm38

This assay targets the same location as MTA transcript cluster(s) TC0700000214.mm.1

This assay is in the 5'UTR region of the AK149251.1, AK149256.1 transcripts.

Amplicon length between 86 and 100

Mus musculus

Probe spans exons

Function(s)

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0700001494.mm.1	TC0700000214.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700001494.mm.1	NR_038092.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700001494.mm.1	NR_038092.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700001493.mm.1	TC0700000214.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700001493.mm.1	NR_038092.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700001493.mm.1	NR_038092.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700001495.mm.1	TC0700000214.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0700001495.mm.1	NR_038092.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700001495.mm.1	NR_038092.1	Refseq