Name: [Mm04335834_m1] [Gm4961]
Creator: Thermo Fisher Scientific
Keywords: [Gm4961] Assay, [kinesin superfamily protein 2C pseudogene] Assay

Assay Details

Gene Symbol: Gm4961
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_045694.2		1 - 2	107		124
GenBank mRNA	AK139799.1	-	1 - 2	94		124
GenBank mRNA	CF173951.1	-	1 - 2	107		124

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BY049597.1	-	1 - 2	107	Chr. 5 - 30092940 - 30095845 [+] on Build GRCm38	124
GenBankmRNA	BY725779.1	-	1 - 2	94	Chr. 5 - 30092954 - 30096111 [+] on Build GRCm38	124
GenBankmRNA	CA560097.2	-	1 - 2	74	Chr. 5 - 30092973 - 30096002 [+] on Build GRCm38	124
GenBankmRNA	CF915405.1	-	1 - 2	85	Chr. 5 - 30092962 - 30096077 [+] on Build GRCm38	124
GenBankmRNA	BQ560380.1	-	1 - 2	74	Chr. 5 - 30092973 - 30096042 [+] on Build GRCm38	124
GenBankmRNA	BY047938.1	-	1 - 2	107	Chr. 5 - 30092940 - 30095803 [+] on Build GRCm38	124

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	thymidylate synthase	Tyms	Ts	-19.3kb	Anti-sense	Chr. 5 - 30058200 - 30073625 on NCBI Build GRCm38
Downstream	RIKEN cDNA 3110082J24 gene	3110082J24Rik	ENSMUSG00000073106	5.9kb	Anti-sense	Chr. 5 - 30103584 - 30106086 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0500000284.mm.1
This assay targets the same location as RTA transcript cluster(s) TC0500001289.rn.1

Set Membership:

Amplicon length greater than or equal to 101

3' Most

Mus musculus

Probe spans exons

MicroArray Probes:

Affymetrix Illumina

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Gene 1.0 ST Array	10528924	-	-
Affymetrix Mouse Gene 1.0 ST Array	10528923	-	-
Affymetrix Mouse Gene 1.1 ST Array	10528922	-	-
Mouse Genome 430 2.0 Array	1456841_PM_at	-	-
Mouse Genome 430 2.0 Array	1456841_at	-	-
Affymetrix Mouse Clariom S Array	PSR0500002177.mm.1	TC0500000284.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500002177.mm.1	NR_045694.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0500002176.mm.1	TC0500000284.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0500002176.mm.1	NR_045694.2	Refseq
Mouse Expression Set 430	1456841_PM_at	-	-
Mouse Expression Set 430	1456841_at	-	-

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Catalog #	4426961
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System Message

Genomic Map