Name: [Mm04336269_s1] [9130221F21Rik]
Creator: Thermo Fisher Scientific
Keywords: [9130221F21Rik] Assay, [RIKEN cDNA 9130221F21 gene] Assay

Assay Details

Gene Symbol: 9130221F21Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_046180.1		3	1724		89
GenBank mRNA	AK033688.1	-	3	1725		89

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	polymerase (RNA) I polypeptide A	Polr1a	194kDa, 3010014K16Rik, RPA194, Rpo1-4, mRPA1	-34.5kb	Anti-sense	Chr. 6 - 71909053 - 71979435 on NCBI Build GRCm38
Downstream	ST3 beta-galactoside alpha-2,3-sialyltransferase 5	St3gal5	3S-T, Siat9, [a]2	81.6kb	Anti-sense	Chr. 6 - 72097554 - 72154570 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0600002477.mm.1

Set Membership:

Amplicon length between 86 and 100

3' Most

Detect Genomic DNA

Mus musculus

Both primers and probe map within a single exon

MicroArray Probes:

Agilent Affymetrix

Array Name	Probe IDs	Targets	Target Type
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	333344	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	309819	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	617153	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	779688	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	499230	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	675810	AK020236.1	genbank_mrna_mouse
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	663098	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	500906	-	-
Agilent SurePrint G3 Mouse CGH Microarray 1x1M	794510	-	-
Agilent SurePrint G3 Mouse CGH Microarray 4x180K	176766	-	-
Agilent Mouse Genome CGH Microarray 44K G4426B	A_53_P150835	-	-
Agilent Mouse Genome CGH Microarray 244A (G4415A)	A_53_P150835	-	-
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P100246	-	-
Agilent Mouse Genome CGH Microarray 105A (G4416A)	A_53_P150835	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P24539649	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P24539646	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P24539652	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P24539654	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P24539656	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P05176304	-	-
Agilent Six_ChIP_02_of_03_v2	A_68_P24539651	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0600019179.mm.1	TC0600002477.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600019179.mm.1	NR_046180.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600019179.mm.1	NR_046180.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600019177.mm.1	TC0600002477.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600019177.mm.1	NR_046180.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600019177.mm.1	NR_046180.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600019178.mm.1	TC0600002477.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0600019178.mm.1	NR_046180.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0600019178.mm.1	NR_046180.1	Refseq

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System Message

Genomic Map