Name: [Mm04412127_m1] [Trim46]
Creator: Thermo Fisher Scientific
Keywords: [Trim46] Assay, [tripartite motif-containing 46] Assay

Assay Details

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Transcript Location	Amplicon Length
GenBankmRNA	BI556915.1	-	1 - 2	39	Chr. 3 - 89234979 - 89238698 [-] on Build GRCm38	67
GenBankmRNA	BQ572116.1	-	4 - 5	536	Chr. 3 - 89237679 - 89242250 [-] on Build GRCm38	67
GenBankmRNA	CA534558.1	-	3 - 4	241	Chr. 3 - 89237695 - 89239345 [-] on Build GRCm38	67
GenBankmRNA	BQ943260.1	-	1 - 2	57	Chr. 3 - 89234880 - 89238716 [-] on Build GRCm38	67
GenBankmRNA	CA534567.1	-	3 - 4	241	Chr. 3 - 89235250 - 89239345 [-] on Build GRCm38	67
GenBankmRNA	BI157606.1	-	1 - 2	38	Chr. 3 - 89235170 - 89238697 [-] on Build GRCm38	67
GenBankmRNA	BY008432.1	-	1 - 2	49	Chr. 3 - 89237623 - 89238707 [-] on Build GRCm38	67

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	mucin 1, transmembrane	Muc1	CD227, EMA, Muc-1	-4.2kb	Anti-sense	Chr. 3 - 89229056 - 89233381 on NCBI Build GRCm38
Downstream	keratinocyte associated protein 2	Krtcap2	0610010I12Rik, Kcp2	7.6kb	Anti-sense	Chr. 3 - 89246300 - 89249723 on NCBI Build GRCm38

This assay targets the same location as MTA transcript cluster(s) TC0300002342.mm.1

Amplicon length less than or equal to 70

3' Most

Mammalian Gene Collection

Mus musculus

1700

Probe spans exons

Function(s) Process(es)

Affymetrix ABI

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0300017927.mm.1	NM_001039466.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300017927.mm.1	NM_001039466.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300017927.mm.1	NM_183037.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0300017927.mm.1	NM_183037.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0300017927.mm.1	TC0300002342.mm.1	MTA TC