Araf
Genomic Map
Back To TopAssay Details
| Gene Symbol: Araf | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001033663.2 | NP_001028835.1 | 5 - 6 | 571 | 102 | |
| NM_022532.2 | NP_071977.1 | 5 - 6 | 571 | 102 | ||
| XM_008773036.1 | XP_008771258.1 | 5 - 6 | 1313 | 102 | ||
| GenBank mRNA | AB158253.1 | - | 4 - 5 | 467 | 102 | |
| BC060568.1 | - | 611 | 102 | |||
| FQ213741.1 | - | 1 - 2 | 143 | 102 | ||
| X06942.1 | - | 4 - 5 | 538 | 102 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0X00001372.rn.1Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
3' Most
Mammalian Gene Collection
Detect Genomic DNA
Recommended Assay
Rattus norvegicus
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
MAPK cascade
protein phosphorylation
regulation of TOR signaling
regulation of proteasomal ubiquitin-dependent protein catabolic process
positive regulation of peptidyl-serine phosphorylation
intracellular signal transduction
negative regulation of apoptotic process
protein serine/threonine kinase activity
MAP kinase kinase kinase activity
ATP binding
metal ion binding
MAPK cascade
protein phosphorylation
regulation of TOR signaling
regulation of proteasomal ubiquitin-dependent protein catabolic process
positive regulation of peptidyl-serine phosphorylation
intracellular signal transduction
negative regulation of apoptotic process
protein serine/threonine kinase activity
MAP kinase kinase kinase activity
ATP binding
metal ion binding
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P150699 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P109880 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P150696 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P150691 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 206905 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 895774 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 727890 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 511552 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 339230 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 639327 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 329709 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 98707 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 869323 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 188972 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 858297 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 730201 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 578667 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 539523 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 119719 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 743537 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 709860 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 76547 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 898740 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 435298 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 561889 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 379553 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 577400 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 189691 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 562609 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 222389 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 60165 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 385425 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 491881 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 232449 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 392530 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 397304 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 1309 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 401428 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 673390 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 448991 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 712174 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 915115 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 340562 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 95939 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 129767 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 148386 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 93415 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 152377 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 163606 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 76379 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 103031 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 89741 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P150699 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P150691 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P109880 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P150696 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P150691 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P109880 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P150696 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P150699 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P109880 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P150699 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P150691 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P150696 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P211440 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P322960 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700506813 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 10413 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 55217 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 69563 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 36981 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 5117 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 26774 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 38446 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 61889 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 61217 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 60757 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 14052 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 59417 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700506813 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10936497 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936506 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936509 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936500 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936491 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936489 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936493 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936492 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936496 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936505 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936504 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936499 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936490 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936495 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936507 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936508 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936503 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936502 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936494 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936501 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10936488 | - | - |
| Rat Genome 230 2.0 Array | 1390196_at | - | - |
| Rat Genome 230 2.0 Array | 1388305_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1390196_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1368390_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1368390_at | - | - |
| Rat Genome 230 2.0 Array | 1388305_at | - | - |
| Affymetrix HT Rat Focus Array | 1388305_at | - | - |
| Affymetrix HT Rat Focus Array | 1388305_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368390_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368390_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0X00008589.rn.1 | TC0X00001372.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0X00008587.rn.1 | TC0X00001372.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0X00008584.rn.1 | TC0X00001372.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0X00008588.rn.1 | TC0X00001372.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0X00008585.rn.1 | TC0X00001372.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0X00008586.rn.1 | TC0X00001372.rn.1 | RTA TC |
| Rat Expression Set 230 | 1368390_PM_at | - | - |
| Rat Expression Set 230 | 1388305_at | - | - |
| Rat Expression Set 230 | 1388305_PM_at | - | - |
| Rat Expression Set 230 | 1368390_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10936488 | - | - |
| Rat Genome U34 Set | X06942_at | - | - |
| Rat Genome U34 Set | rc_AI227665_s_at | - | - |
| Rat Genome U34 Set | rc_AI172412_at | - | - |
| Rat Genome U34 Set | rc_AI227665_s_at | - | - |
| Rat Genome U34 Set | X06942_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1352852 | - | - |
| RatRef-12 Expression BeadChip | ILMN_66915 | - | - |
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