Tdg
Genomic Map
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| Gene Symbol: Tdg | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_053729.1 | NP_446181.1 | 9 - 10 | 1129 | 74 | |
| GenBank mRNA | AY026945.1 | - | 9 - 10 | 1129 | 74 | |
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Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0700002400.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
3' Most
Detect Genomic DNA
Rattus norvegicus
1700
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription by RNA polymerase II
base-excision repair
mismatch repair
transcription by RNA polymerase II
negative regulation of protein binding
negative regulation of chromatin binding
regulation of gene expression, epigenetic
DNA demethylation
DNA binding
double-stranded DNA binding
transcription coregulator activity
protein kinase C binding
transcription factor binding
pyrimidine-specific mismatch base pair DNA N-glycosylase activity
hydrolase activity, hydrolyzing N-glycosyl compounds
DNA N-glycosylase activity
protein domain specific binding
mismatched DNA binding
SUMO binding
protein homodimerization activity
negative regulation of transcription by RNA polymerase II
base-excision repair
mismatch repair
transcription by RNA polymerase II
negative regulation of protein binding
negative regulation of chromatin binding
regulation of gene expression, epigenetic
DNA demethylation
DNA binding
double-stranded DNA binding
transcription coregulator activity
protein kinase C binding
transcription factor binding
pyrimidine-specific mismatch base pair DNA N-glycosylase activity
hydrolase activity, hydrolyzing N-glycosyl compounds
DNA N-glycosylase activity
protein domain specific binding
mismatched DNA binding
SUMO binding
protein homodimerization activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P102583 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 836120 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 719680 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 549000 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 507533 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 565354 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 79579 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 100490 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 961666 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 142209 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 379 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 425221 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 727656 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 140646 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 304033 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 155736 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 2923 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 58658 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P102583 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P102583 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P102583 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P15341 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P121015 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 68428 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 46392 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 81372 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10901464 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901461 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901468 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901460 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901463 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901465 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901459 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901467 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901462 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901466 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10901458 | - | - |
| Rat Genome 230 2.0 Array | 1395074_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1368268_at | - | - |
| Rat Genome 230 2.0 Array | 1368268_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1395074_at | - | - |
| Affymetrix HT Rat Focus Array | 1395074_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368268_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1395074_at | - | - |
| Affymetrix HT Rat Focus Array | 1368268_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0700018998.rn.1 | TC0700002400.rn.1 | RTA TC |
| Rat Expression Set 230 | 1368268_at | - | - |
| Rat Expression Set 230 | 1368268_PM_at | - | - |
| Rat Expression Set 230 | 1395074_PM_at | - | - |
| Rat Expression Set 230 | 1395074_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901458 | - | - |
| Rat Genome U34 Set | rc_AI045300_at | - | - |
| Rat Genome U34 Set | rc_AA996513_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21912755 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1356046 | - | - |
| RatRef-12 Expression BeadChip | ILMN_66382 | - | - |
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