Vcp
Genomic Map
Back To TopAssay Details
| Gene Symbol: Vcp | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_053864.2 | NP_446316.1 | 15 - 16 | 2372 | 65 | |
| GenBank mRNA | BC060518.1 | - | 15 - 16 | 2372 | 65 | |
| U11760.1 | - | 15 - 16 | 2404 | 65 | ||
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Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0500002599.rn.1Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
double-strand break repair
ubiquitin-dependent protein catabolic process
endoplasmic reticulum to Golgi vesicle-mediated transport
activation of cysteine-type endopeptidase activity involved in apoptotic process
cellular response to DNA damage stimulus
protein ubiquitination
protein N-linked glycosylation via asparagine
translesion synthesis
ubiquitin-dependent ERAD pathway
retrograde protein transport, ER to cytosol
positive regulation of protein-containing complex assembly
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
protein hexamerization
positive regulation of protein catabolic process
protein homooligomerization
aggresome assembly
positive regulation of protein K63-linked deubiquitination
positive regulation of Lys63-specific deubiquitinase activity
RNA binding
signaling receptor binding
protein binding
ATP binding
lipid binding
ATP hydrolysis activity
protein phosphatase binding
protein domain specific binding
polyubiquitin modification-dependent protein binding
deubiquitinase activator activity
identical protein binding
ADP binding
protein-containing complex binding
ubiquitin-specific protease binding
double-strand break repair
ubiquitin-dependent protein catabolic process
endoplasmic reticulum to Golgi vesicle-mediated transport
activation of cysteine-type endopeptidase activity involved in apoptotic process
cellular response to DNA damage stimulus
protein ubiquitination
protein N-linked glycosylation via asparagine
translesion synthesis
ubiquitin-dependent ERAD pathway
retrograde protein transport, ER to cytosol
positive regulation of protein-containing complex assembly
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
protein hexamerization
positive regulation of protein catabolic process
protein homooligomerization
aggresome assembly
positive regulation of protein K63-linked deubiquitination
positive regulation of Lys63-specific deubiquitinase activity
RNA binding
signaling receptor binding
protein binding
ATP binding
lipid binding
ATP hydrolysis activity
protein phosphatase binding
protein domain specific binding
polyubiquitin modification-dependent protein binding
deubiquitinase activator activity
identical protein binding
ADP binding
protein-containing complex binding
ubiquitin-specific protease binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P156433 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 665759 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 350272 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 338693 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 664087 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 488714 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 845452 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 82371 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 151916 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 514851 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 361408 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 969970 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 408890 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 757170 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 893935 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 147263 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 57500 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 137743 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P156433 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P156433 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P156433 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P156433 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700145748 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 5402 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 77719 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 30776 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700145748 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10876237 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876240 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876227 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876235 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876232 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876226 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876229 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876228 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876239 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876231 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876241 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876234 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876233 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876236 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876230 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876225 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876238 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10876224 | - | - |
| Rat Genome 230 2.0 Array | 1367455_at | - | - |
| Rat Genome 230 2.0 Array | 1367455_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1367455_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1367455_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0500019217.rn.1 | TC0500002599.rn.1 | RTA TC |
| Rat Expression Set 230 | 1367455_at | - | - |
| Rat Expression Set 230 | 1367455_PM_at | - | - |
| Rat Expression Set 230 | 1367455_at | - | - |
| Rat Expression Set 230 | 1367455_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10876224 | - | - |
| Rat Genome U34 Set | rc_AI044341_s_at | - | - |
| Rat Genome U34 Set | U11760_at | - | - |
| Rat Genome U34 Set | rc_AI059675_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21583527 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1363637 | - | - |
| RatRef-12 Expression BeadChip | ILMN_62115 | - | - |
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