Psip1
Genomic Map
Back To TopAssay Details
| Gene Symbol: Psip1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_175765.2 | NP_786941.1 | 13 - 14 | 1518 | 127 | |
| XM_006238353.2 | XP_006238415.1 | 14 - 15 | 1745 | 127 | ||
| XM_006238354.2 | XP_006238416.1 | 14 - 15 | 1741 | 127 | ||
| GenBank mRNA | AF339084.1 | - | 13 - 14 | 1518 | 127 | |
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Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0500003045.rn.1Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
3' Most
Detect Genomic DNA
Rattus norvegicus
1700
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
mRNA 5'-splice site recognition
transcription, DNA-templated
regulation of transcription, DNA-templated
response to oxidative stress
response to heat
positive regulation of transcription by RNA polymerase II
chromatin binding
transcription coactivator activity
RNA binding
supercoiled DNA binding
mRNA 5'-splice site recognition
transcription, DNA-templated
regulation of transcription, DNA-templated
response to oxidative stress
response to heat
positive regulation of transcription by RNA polymerase II
chromatin binding
transcription coactivator activity
RNA binding
supercoiled DNA binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P133370 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_43_P23280 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 20998 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 430725 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 158808 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 24802 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 736890 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 152854 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 414151 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 844836 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 234741 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 894548 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 457561 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 20500 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 112963 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 276715 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 926411 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 558710 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 460292 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 861702 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 584705 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 586852 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 883635 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 589082 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 321865 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 801131 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 70075 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 50317 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 155974 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 5318 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P133370 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P23280 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P23280 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P133370 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_43_P23280 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P133370 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P23280 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P510690 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 6631 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 85821 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 70438 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 88067 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10877863 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877865 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877874 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877861 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877868 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877871 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877870 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877864 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877873 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877866 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877869 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877872 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877867 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877862 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10877860 | - | - |
| Rat Genome 230 2.0 Array | 1397789_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1373350_at | - | - |
| Rat Genome 230 2.0 Array | 1393267_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1394417_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1395165_at | - | - |
| Rat Genome 230 2.0 Array | 1397789_at | - | - |
| Rat Genome 230 2.0 Array | 1373350_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1394417_at | - | - |
| Rat Genome 230 2.0 Array | 1393267_at | - | - |
| Rat Genome 230 2.0 Array | 1395165_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1395165_at | - | - |
| Affymetrix HT Rat Focus Array | 1373350_at | - | - |
| Affymetrix HT Rat Focus Array | 1395165_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1373350_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1393267_at | - | - |
| Affymetrix HT Rat Focus Array | 1393267_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0500022464.rn.1 | TC0500003045.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0500022461.rn.1 | TC0500003045.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0500022463.rn.1 | TC0500003045.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0500022462.rn.1 | TC0500003045.rn.1 | RTA TC |
| Rat Expression Set 230 | 1373350_PM_at | - | - |
| Rat Expression Set 230 | 1373350_at | - | - |
| Rat Expression Set 230 | 1395165_PM_at | - | - |
| Rat Expression Set 230 | 1393267_PM_at | - | - |
| Rat Expression Set 230 | 1393267_at | - | - |
| Rat Expression Set 230 | 1394417_at | - | - |
| Rat Expression Set 230 | 1395165_at | - | - |
| Rat Expression Set 230 | 1394417_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10877860 | - | - |
| Rat Genome U34 Set | rc_AI071640_at | - | - |
| Rat Genome U34 Set | rc_AI236685_f_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21719580 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1352860 | - | - |
| RatRef-12 Expression BeadChip | ILMN_69049 | - | - |
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